Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm8032-201ENSMUST00000171009 574 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm8669-201ENSMUST00000183839 945 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxa9P09631 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm9278-201ENSMUST00000205508 553 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm19880-201ENSMUST00000207731 318 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm18904-201ENSMUST00000218756 329 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Thoc7-209ENSMUST00000225325 765 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.62□□□□□ -1.51
Hoxa9P09631 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hoxa9P09631 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxa9P09631 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxa9P09631 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm14756-201ENSMUST00000116395 240 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm15838-201ENSMUST00000161575 180 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Mir3062-201ENSMUST00000174986 105 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Mir3090-201ENSMUST00000175597 87 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm24465-201ENSMUST00000178398 107 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm37581-201ENSMUST00000192371 988 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm44184-201ENSMUST00000204290 132 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm17984-201ENSMUST00000205286 859 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm19256-201ENSMUST00000218550 231 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.61□□□□□ -1.51
Hoxa9P09631 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Hoxa9P09631 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.61□□□□□ -1.51
Hoxa9P09631 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm23294-201ENSMUST00000104150 164 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm11227-201ENSMUST00000119774 471 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm15490-201ENSMUST00000119894 387 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.6□□□□□ -1.51
Hoxa9P09631 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.6□□□□□ -1.51
Hoxa9P09631 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms