Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Syne4Q8CII8 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.5□□□□□ -1.37
Syne4Q8CII8 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Syne4Q8CII8 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Syne4Q8CII8 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Syne4Q8CII8 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Syne4Q8CII8 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Syne4Q8CII8 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Syne4Q8CII8 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm12985-201ENSMUST00000118376 183 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm15803-201ENSMUST00000120118 394 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm16060-201ENSMUST00000153140 478 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm11507-201ENSMUST00000156462 412 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm25534-201ENSMUST00000175365 125 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm33952-201ENSMUST00000197795 408 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm8703-201ENSMUST00000203793 730 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm43922-201ENSMUST00000205071 328 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm45082-201ENSMUST00000206082 601 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm6195-201ENSMUST00000063059 357 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm23514-201ENSMUST00000082827 130 ntBASIC6.49□□□□□ -1.37
Syne4Q8CII8 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Syne4Q8CII8 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm15152-201ENSMUST00000121540 394 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm25430-201ENSMUST00000157614 289 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm22650-201ENSMUST00000175138 105 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm5735-201ENSMUST00000207053 167 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm19880-201ENSMUST00000207731 318 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm6009-201ENSMUST00000210848 280 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Mir27a-201ENSMUST00000083510 87 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Gm9386-201ENSMUST00000095195 381 ntBASIC6.48□□□□□ -1.37
Syne4Q8CII8 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Syne4Q8CII8 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms