Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Vps53Q8CCB4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.7□□□□□ -1.34
Vps53Q8CCB4 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Vps53Q8CCB4 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Vps53Q8CCB4 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm12077-201ENSMUST00000117049 364 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm14957-201ENSMUST00000121069 817 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm14369-201ENSMUST00000121355 285 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm16260-201ENSMUST00000155141 304 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm23224-201ENSMUST00000158122 271 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm20453-201ENSMUST00000173968 226 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm4322-201ENSMUST00000191094 336 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm18427-201ENSMUST00000195422 515 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm44061-201ENSMUST00000203962 1195 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm45008-201ENSMUST00000206420 493 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm23330-201ENSMUST00000082660 164 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm23502-201ENSMUST00000083902 145 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Vps53Q8CCB4 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Mir449c-201ENSMUST00000102192 109 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm13532-201ENSMUST00000120373 240 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm12494-201ENSMUST00000121684 521 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm26372-201ENSMUST00000157831 236 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm23280-201ENSMUST00000157905 139 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm16147-201ENSMUST00000162143 373 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm24103-201ENSMUST00000174930 77 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm16531-201ENSMUST00000180658 967 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm37708-201ENSMUST00000192337 895 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43779-201ENSMUST00000196691 829 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43222-201ENSMUST00000199013 603 ntBASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.68□□□□□ -1.34
Vps53Q8CCB4 Gm18413-201ENSMUST00000221573 655 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms