Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.67□□□□□ -1.34
Ddx55Q6ZPL9 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm6427-201ENSMUST00000118721 979 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm11990-201ENSMUST00000121505 897 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm12998-201ENSMUST00000122445 789 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm22985-201ENSMUST00000122754 116 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm28149-201ENSMUST00000187102 378 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm28768-201ENSMUST00000189034 378 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm43090-201ENSMUST00000202459 314 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm45608-201ENSMUST00000210948 389 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 AC153529.1-201ENSMUST00000217818 370 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm23795-201ENSMUST00000084006 137 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx55Q6ZPL9 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Mir193b-201ENSMUST00000103784 79 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm12577-201ENSMUST00000119701 574 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm16563-201ENSMUST00000162673 423 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm22355-201ENSMUST00000175531 96 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm6520-201ENSMUST00000200636 410 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx55Q6ZPL9 Gm18039-201ENSMUST00000217816 728 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms