Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Scn1bP97952 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Scn1bP97952 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Scn1bP97952 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Scn1bP97952 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.15□□□□□ -1.59
Scn1bP97952 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.15□□□□□ -1.59
Scn1bP97952 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Scn1bP97952 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Scn1bP97952 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.15□□□□□ -1.59
Scn1bP97952 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm11271-201ENSMUST00000116054 440 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm12375-201ENSMUST00000119331 921 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm12041-201ENSMUST00000121606 602 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm13077-201ENSMUST00000121941 484 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.14□□□□□ -1.59
Scn1bP97952 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.14□□□□□ -1.59
Scn1bP97952 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm16269-201ENSMUST00000160532 409 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm6264-201ENSMUST00000160802 624 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm22650-201ENSMUST00000175138 105 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm22420-201ENSMUST00000178795 126 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Mir6412-201ENSMUST00000184477 97 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.14□□□□□ -1.59
Scn1bP97952 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm43717-201ENSMUST00000198684 310 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm31211-201ENSMUST00000199170 253 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm7181-201ENSMUST00000202197 434 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm18482-201ENSMUST00000202405 760 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm29781-201ENSMUST00000203862 478 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm44865-201ENSMUST00000207240 531 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm33178-201ENSMUST00000212090 257 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Scn1bP97952 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scn1bP97952 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Scn1bP97952 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.14□□□□□ -1.59
Scn1bP97952 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Scn1bP97952 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Scn1bP97952 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm25346-201ENSMUST00000104509 128 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm14786-201ENSMUST00000117127 944 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm11212-201ENSMUST00000118337 618 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm14294-201ENSMUST00000119749 751 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Mir1953-201ENSMUST00000157866 89 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm5947-201ENSMUST00000179156 714 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm5645-201ENSMUST00000179597 714 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms