Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm43850-201ENSMUST00000202021 578 ntBASIC6.42□□□□□ -1.38
Usp4P35123 Gm44003-201ENSMUST00000203024 490 ntBASIC6.42□□□□□ -1.38
Usp4P35123 Gm44571-201ENSMUST00000208092 533 ntBASIC6.42□□□□□ -1.38
Usp4P35123 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp4P35123 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.42□□□□□ -1.38
Usp4P35123 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.42□□□□□ -1.38
Usp4P35123 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.42□□□□□ -1.38
Usp4P35123 CT030684.2-201ENSMUST00000228946 826 ntBASIC6.42□□□□□ -1.38
Usp4P35123 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Usp4P35123 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.42□□□□□ -1.38
Usp4P35123 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Usp4P35123 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Usp4P35123 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.42□□□□□ -1.38
Usp4P35123 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.42□□□□□ -1.38
Usp4P35123 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp4P35123 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp4P35123 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp4P35123 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm15901-201ENSMUST00000117663 941 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm13455-201ENSMUST00000118767 517 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm15502-201ENSMUST00000121449 208 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm12807-201ENSMUST00000121546 962 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm13024-201ENSMUST00000121756 718 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm12438-201ENSMUST00000122034 336 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp4P35123 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm25342-201ENSMUST00000157459 122 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm23968-201ENSMUST00000175047 125 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm44370-201ENSMUST00000175436 112 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm7634-201ENSMUST00000185778 553 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm28639-201ENSMUST00000191519 481 ntBASIC6.41□□□□□ -1.38
Usp4P35123 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm18952-201ENSMUST00000194471 846 ntBASIC6.41□□□□□ -1.38
Usp4P35123 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm43489-201ENSMUST00000196810 993 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm43743-202ENSMUST00000198353 491 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp4P35123 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.41□□□□□ -1.38
Usp4P35123 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm45485-201ENSMUST00000211229 357 ntBASIC6.41□□□□□ -1.38
Usp4P35123 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm19709-201ENSMUST00000215403 482 ntBASIC6.41□□□□□ -1.38
Usp4P35123 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp4P35123 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.41□□□□□ -1.38
Usp4P35123 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Usp4P35123 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp4P35123 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Usp4P35123 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.41□□□□□ -1.38
Usp4P35123 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp4P35123 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp4P35123 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms