Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col1a1P11087 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Gm23508-201ENSMUST00000083079 72 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col1a1P11087 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.38□□□□□ -1.39
Col1a1P11087 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col1a1P11087 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Gm4845-201ENSMUST00000179202 562 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Gm26925-201ENSMUST00000182470 957 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Gm2367-201ENSMUST00000192374 472 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col1a1P11087 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.37□□□□□ -1.39
Col1a1P11087 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col1a1P11087 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col1a1P11087 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm12328-201ENSMUST00000118611 197 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Gm13213-201ENSMUST00000119668 474 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Gm13149-201ENSMUST00000122071 339 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm9687-201ENSMUST00000189312 602 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm7721-201ENSMUST00000200446 546 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.36□□□□□ -1.39
Col1a1P11087 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.36□□□□□ -1.39
Col1a1P11087 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col1a1P11087 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Col1a1P11087 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.36□□□□□ -1.39
Col1a1P11087 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col1a1P11087 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Col1a1P11087 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.35□□□□□ -1.39
Col1a1P11087 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Gm22899-201ENSMUST00000104540 131 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm12850-201ENSMUST00000119210 436 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm25605-201ENSMUST00000158364 124 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm3531-201ENSMUST00000162698 489 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.35□□□□□ -1.39
Col1a1P11087 Gm4714-201ENSMUST00000203395 279 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 CT025525.4-201ENSMUST00000227728 277 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 Gm22826-201ENSMUST00000083774 165 ntBASIC6.35□□□□□ -1.39
Col1a1P11087 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col1a1P11087 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms