Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm45226-201ENSMUST00000206602 288 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm12007-201ENSMUST00000120978 597 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm26170-201ENSMUST00000158419 148 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Cdh23Q99PF4 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm14845-201ENSMUST00000121259 306 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm45651-201ENSMUST00000210857 335 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm37077-201ENSMUST00000195723 3691 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm25564-201ENSMUST00000104604 132 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm11227-201ENSMUST00000119774 471 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm15791-201ENSMUST00000120365 319 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm28443-201ENSMUST00000189081 698 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh23Q99PF4 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm12112-201ENSMUST00000117772 231 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm14688-201ENSMUST00000119169 303 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm24186-201ENSMUST00000157983 127 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm37884-201ENSMUST00000191857 818 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm37961-201ENSMUST00000192729 299 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm32453-201ENSMUST00000204183 456 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm24763-201ENSMUST00000083688 190 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh23Q99PF4 Gm5473-201ENSMUST00000179326 642 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms