Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm22519-201ENSMUST00000158270 178 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm6900-201ENSMUST00000178971 342 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm27030-201ENSMUST00000182551 464 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm37837-201ENSMUST00000191743 604 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Trav3-2-201ENSMUST00000198999 305 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm36371-201ENSMUST00000209043 1103 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm5119-201ENSMUST00000215858 634 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AC153852.1-201ENSMUST00000217881 567 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AV026068-216ENSMUST00000223874 328 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AV026068-218ENSMUST00000223980 575 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AC164116.1-201ENSMUST00000225810 622 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AC107369.1-201ENSMUST00000227373 860 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm5612-201ENSMUST00000053326 375 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm13455-201ENSMUST00000118767 517 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm12994-201ENSMUST00000119601 447 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm23891-201ENSMUST00000158114 138 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm7654-201ENSMUST00000186738 683 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm7897-201ENSMUST00000193981 554 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm43015-201ENSMUST00000199087 565 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm45874-201ENSMUST00000212423 346 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm18103-201ENSMUST00000216621 779 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm9535-201ENSMUST00000218499 768 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm8526-201ENSMUST00000079153 475 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.09□□□□□ -1.27
Clp1Q99LI9 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Clp1Q99LI9 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms