Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox18P43680 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox18P43680 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Sox18P43680 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox18P43680 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox18P43680 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm22707-201ENSMUST00000103834 110 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm23768-201ENSMUST00000104440 131 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Sox18P43680 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm16073-201ENSMUST00000116032 517 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm14681-201ENSMUST00000118047 411 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm13229-201ENSMUST00000118238 340 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm12890-201ENSMUST00000120885 373 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm23533-201ENSMUST00000157540 245 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Mir1930-201ENSMUST00000158799 84 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm26177-201ENSMUST00000178683 107 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm8532-201ENSMUST00000179174 461 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm20162-201ENSMUST00000193629 871 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm2040-201ENSMUST00000202979 289 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox18P43680 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.07□□□□□ -1.28
Sox18P43680 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.07□□□□□ -1.28
Sox18P43680 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.07□□□□□ -1.28
Sox18P43680 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox18P43680 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox18P43680 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox18P43680 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.07□□□□□ -1.28
Sox18P43680 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox18P43680 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox18P43680 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox18P43680 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Sox18P43680 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Sox18P43680 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Sox18P43680 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox18P43680 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox18P43680 Gm22781-201ENSMUST00000104083 137 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm12244-201ENSMUST00000119500 291 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm11796-201ENSMUST00000120208 972 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm24419-201ENSMUST00000157875 332 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm23069-201ENSMUST00000158240 311 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm23007-201ENSMUST00000158951 177 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Ear-ps7-201ENSMUST00000161287 442 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sox18P43680 Gm23450-201ENSMUST00000178285 91 ntBASIC7.06□□□□□ -1.28
Sox18P43680 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sox18P43680 Gm27699-201ENSMUST00000183553 180 ntBASIC7.06□□□□□ -1.28
Sox18P43680 Mir7072-201ENSMUST00000184542 60 ntBASIC7.06□□□□□ -1.28
Sox18P43680 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox18P43680 Gm37620-201ENSMUST00000192910 501 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms