Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm5777-201ENSMUST00000177265 448 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm37689-201ENSMUST00000193139 275 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm4928-201ENSMUST00000219622 850 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm24170-201ENSMUST00000104124 133 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm24608-201ENSMUST00000104381 136 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm21638-201ENSMUST00000179473 836 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Col6a3E9PWQ3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm23294-201ENSMUST00000104150 164 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm11318-201ENSMUST00000118640 961 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm23228-201ENSMUST00000157296 270 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm43350-201ENSMUST00000196382 711 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm23624-201ENSMUST00000082463 321 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm22590-201ENSMUST00000104247 128 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm22718-201ENSMUST00000122701 315 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm18802-201ENSMUST00000186270 888 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm2623-201ENSMUST00000199229 286 ntBASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms