Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.12□□□□□ -1.27
Clp1Q99LI9 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Gm45149-201ENSMUST00000206459 2172 ntBASIC7.12□□□□□ -1.27
Clp1Q99LI9 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Clp1Q99LI9 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm37250-201ENSMUST00000194919 2388 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Mir1960-201ENSMUST00000157488 78 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm24724-201ENSMUST00000158230 107 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm22158-201ENSMUST00000158411 126 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm17366-201ENSMUST00000167629 187 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm27507-201ENSMUST00000184199 93 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm27460-201ENSMUST00000184213 100 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Mir7653-201ENSMUST00000184358 61 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm29086-201ENSMUST00000186774 222 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm29085-201ENSMUST00000187108 225 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm18969-201ENSMUST00000189423 730 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm28337-201ENSMUST00000190425 666 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm18752-201ENSMUST00000192876 608 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm44404-201ENSMUST00000203979 636 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm18838-201ENSMUST00000204855 886 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm45409-201ENSMUST00000211486 252 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm18487-201ENSMUST00000215826 878 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Mir421-201ENSMUST00000083575 76 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Clp1Q99LI9 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.11□□□□□ -1.27
Clp1Q99LI9 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm7451-201ENSMUST00000208382 1392 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm43990-201ENSMUST00000203790 1691 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm24434-201ENSMUST00000104081 132 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm13087-201ENSMUST00000118298 256 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm7189-201ENSMUST00000119811 429 ntBASIC7.1□□□□□ -1.27
Clp1Q99LI9 Gm12618-201ENSMUST00000121754 483 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms