Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 CT010475.1-201ENSMUST00000224753 526 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim35Q8C006 Gm43071-201ENSMUST00000197233 2032 ntBASIC8.61□□□□□ -1.03
Trim35Q8C006 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim35Q8C006 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Ighe-202ENSMUST00000223335 1460 ntAPPRIS P5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm24263-201ENSMUST00000104059 107 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Mir2139-201ENSMUST00000158669 95 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm12728-202ENSMUST00000184254 234 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm27283-201ENSMUST00000184853 323 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm12728-203ENSMUST00000185012 234 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm38358-201ENSMUST00000195144 428 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm7442-201ENSMUST00000197778 383 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm18485-201ENSMUST00000203788 1114 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm44470-201ENSMUST00000203913 142 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Rps11-204ENSMUST00000211725 493 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 AC164105.1-202ENSMUST00000213920 999 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim35Q8C006 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim35Q8C006 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm10335-201ENSMUST00000096020 468 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Gm15964-201ENSMUST00000138207 2745 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 1700028E10Rik-203ENSMUST00000201142 2310 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 C79130-201ENSMUST00000199610 4296 ntBASIC8.6□□□□□ -1.03
Trim35Q8C006 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Nnt-202ENSMUST00000099149 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim35Q8C006 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Slc24a2-201ENSMUST00000044990 2218 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim35Q8C006 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Apex2-206ENSMUST00000112727 1663 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm43219-201ENSMUST00000197972 1937 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Vsnl1-201ENSMUST00000072299 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Ighv1-85-201ENSMUST00000103552 351 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim35Q8C006 n-R5s67-201ENSMUST00000104336 114 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm14622-201ENSMUST00000117117 468 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm14971-201ENSMUST00000117980 663 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm5263-201ENSMUST00000163646 601 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim35Q8C006 2410137M14Rik-202ENSMUST00000173707 724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm25301-201ENSMUST00000175285 113 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm25193-201ENSMUST00000176615 97 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm26337-201ENSMUST00000178000 79 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms