Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Mir193b-201ENSMUST00000103784 79 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm24429-201ENSMUST00000104076 132 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm11507-201ENSMUST00000156462 412 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Mir7687-201ENSMUST00000184722 59 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm33952-201ENSMUST00000197795 408 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18215-201ENSMUST00000204429 798 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm44048-201ENSMUST00000204531 361 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18468-201ENSMUST00000207321 369 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18470-201ENSMUST00000207467 420 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18465-201ENSMUST00000207468 369 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18464-201ENSMUST00000207803 420 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18458-201ENSMUST00000207908 369 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm18461-201ENSMUST00000208421 420 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm6049-201ENSMUST00000222369 458 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
Usp47Q8BY87 AC154640.4-201ENSMUST00000226647 4640 ntBASIC7.69□□□□□ -1.18
Usp47Q8BY87 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp47Q8BY87 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm15803-201ENSMUST00000120118 394 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm7670-201ENSMUST00000121272 641 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm21909-201ENSMUST00000178260 439 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm37444-201ENSMUST00000193605 439 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm44281-201ENSMUST00000203090 166 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm18007-201ENSMUST00000205019 844 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm19256-201ENSMUST00000218550 231 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 AC192088.3-201ENSMUST00000227858 831 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm18853-201ENSMUST00000183629 3596 ntBASIC7.68□□□□□ -1.18
Usp47Q8BY87 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.68□□□□□ -1.18
Usp47Q8BY87 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm38351-201ENSMUST00000195466 2518 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm22266-201ENSMUST00000104011 138 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm12685-201ENSMUST00000121702 214 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm28061-201ENSMUST00000189085 807 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm37436-201ENSMUST00000193842 1085 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm44074-201ENSMUST00000204562 337 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm18601-201ENSMUST00000220831 634 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm25139-201ENSMUST00000083247 210 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 AC121870.1-201ENSMUST00000216279 4879 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp47Q8BY87 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp47Q8BY87 Gm37834-201ENSMUST00000194517 3035 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms