Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm30155-201ENSMUST00000223458 339 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm25005-201ENSMUST00000083812 156 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm14404-201ENSMUST00000119117 1660 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf4Q6PFF0 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm42701-201ENSMUST00000196117 1657 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm14614-201ENSMUST00000119873 384 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm11260-201ENSMUST00000121163 942 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm16139-201ENSMUST00000160015 420 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm19815-201ENSMUST00000175818 335 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm28006-201ENSMUST00000183841 122 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm21877-201ENSMUST00000185640 694 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm43108-201ENSMUST00000200525 293 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm44380-201ENSMUST00000203125 293 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm9375-201ENSMUST00000208899 903 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm23378-201ENSMUST00000082942 107 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.24□□□□□ -1.41
Scaf4Q6PFF0 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Gm42614-201ENSMUST00000198724 1554 ntBASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf4Q6PFF0 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms