Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Sox1P53783 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox1P53783 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm22771-201ENSMUST00000104449 91 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm5073-201ENSMUST00000118222 820 ntBASIC6.81□□□□□ -1.32
Sox1P53783 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm14520-201ENSMUST00000119258 387 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm13473-201ENSMUST00000119289 367 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm8761-201ENSMUST00000121507 955 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm7931-201ENSMUST00000121537 271 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm15885-201ENSMUST00000122114 388 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm15111-201ENSMUST00000122142 878 ntBASIC6.81□□□□□ -1.32
Sox1P53783 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm23408-201ENSMUST00000158523 265 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm8358-201ENSMUST00000167222 555 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Sox1P53783 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm20615-201ENSMUST00000177503 705 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm25598-201ENSMUST00000179031 107 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Sox1P53783 Mir6963-201ENSMUST00000183535 71 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Mir6417-201ENSMUST00000183815 116 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm27539-201ENSMUST00000184971 224 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm18185-201ENSMUST00000186725 667 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox1P53783 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm44330-201ENSMUST00000200106 143 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm44604-201ENSMUST00000205475 496 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Gm7495-201ENSMUST00000215099 426 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm8125-201ENSMUST00000216602 738 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm6362-201ENSMUST00000217686 836 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.81□□□□□ -1.32
Sox1P53783 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.81□□□□□ -1.32
Sox1P53783 AC167977.1-201ENSMUST00000221384 234 ntBASIC6.81□□□□□ -1.32
Sox1P53783 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.81□□□□□ -1.32
Sox1P53783 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox1P53783 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
Sox1P53783 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Zfp640-202ENSMUST00000224116 1562 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.81□□□□□ -1.32
Sox1P53783 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox1P53783 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox1P53783 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sox1P53783 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.8□□□□□ -1.32
Sox1P53783 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox1P53783 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox1P53783 Gm25537-201ENSMUST00000103851 109 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm15108-201ENSMUST00000116160 803 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm15209-201ENSMUST00000117703 400 ntBASIC6.8□□□□□ -1.32
Sox1P53783 Gm14220-201ENSMUST00000118114 449 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms