Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm22326-201ENSMUST00000158897 351 ntBASIC5.56□□□□□ -1.52
HttP42859 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HttP42859 Gm20428-201ENSMUST00000174365 283 ntBASIC5.56□□□□□ -1.52
HttP42859 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.56□□□□□ -1.52
HttP42859 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.56□□□□□ -1.52
HttP42859 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.56□□□□□ -1.52
HttP42859 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.56□□□□□ -1.52
HttP42859 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.56□□□□□ -1.52
HttP42859 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HttP42859 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Gm24581-201ENSMUST00000103962 133 ntBASIC5.56□□□□□ -1.52
HttP42859 Gm25726-201ENSMUST00000104529 129 ntBASIC5.56□□□□□ -1.52
HttP42859 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Gm16394-201ENSMUST00000117289 675 ntBASIC5.56□□□□□ -1.52
HttP42859 Gm20519-201ENSMUST00000173684 359 ntBASIC5.56□□□□□ -1.52
HttP42859 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.56□□□□□ -1.52
HttP42859 Gm43444-201ENSMUST00000198123 291 ntBASIC5.56□□□□□ -1.52
HttP42859 Gm2314-201ENSMUST00000200391 586 ntBASIC5.56□□□□□ -1.52
HttP42859 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.56□□□□□ -1.52
HttP42859 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.56□□□□□ -1.52
HttP42859 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
HttP42859 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.56□□□□□ -1.52
HttP42859 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.55□□□□□ -1.52
HttP42859 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HttP42859 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.55□□□□□ -1.52
HttP42859 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.55□□□□□ -1.52
HttP42859 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.55□□□□□ -1.52
HttP42859 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.55□□□□□ -1.52
HttP42859 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.55□□□□□ -1.52
HttP42859 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HttP42859 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.55□□□□□ -1.52
HttP42859 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.55□□□□□ -1.52
HttP42859 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HttP42859 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.55□□□□□ -1.52
HttP42859 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HttP42859 Gm44237-201ENSMUST00000205183 936 ntBASIC5.55□□□□□ -1.52
HttP42859 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.55□□□□□ -1.52
HttP42859 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.55□□□□□ -1.52
HttP42859 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HttP42859 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.55□□□□□ -1.52
HttP42859 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HttP42859 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HttP42859 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HttP42859 Gm45528-201ENSMUST00000209854 3145 ntBASIC5.54□□□□□ -1.52
HttP42859 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HttP42859 Gm11931-201ENSMUST00000121630 447 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm21909-201ENSMUST00000178260 439 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm27528-201ENSMUST00000183544 205 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm9134-201ENSMUST00000193186 551 ntBASIC5.54□□□□□ -1.52
HttP42859 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HttP42859 Gm14933-201ENSMUST00000118840 481 ntBASIC5.54□□□□□ -1.52
HttP42859 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HttP42859 Gm25058-201ENSMUST00000157365 128 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm9442-201ENSMUST00000194242 319 ntBASIC5.54□□□□□ -1.52
HttP42859 Gm43350-201ENSMUST00000196382 711 ntBASIC5.54□□□□□ -1.52
HttP42859 Snora52-201ENSMUST00000082732 137 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms