Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm16149-201ENSMUST00000117631 309 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm14620-201ENSMUST00000120656 383 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm25865-201ENSMUST00000158247 104 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm3170-201ENSMUST00000168753 850 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm23631-201ENSMUST00000175291 123 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm3348-201ENSMUST00000177813 850 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col18a1P39061 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Col18a1P39061 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col18a1P39061 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm14103-201ENSMUST00000119075 366 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC7.62□□□□□ -1.19
Col18a1P39061 AC127279.1-201ENSMUST00000220140 637 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 AC164629.1-201ENSMUST00000220250 1113 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col18a1P39061 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Col18a1P39061 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 AC116726.1-201ENSMUST00000215028 3497 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.62□□□□□ -1.19
Col18a1P39061 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col18a1P39061 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Col18a1P39061 Gm5583-201ENSMUST00000174328 1519 ntBASIC7.62□□□□□ -1.19
Col18a1P39061 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm25315-201ENSMUST00000116823 121 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm11346-201ENSMUST00000118346 704 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm25293-201ENSMUST00000122792 285 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm24103-201ENSMUST00000174930 77 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Mir7012-201ENSMUST00000183900 64 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm20586-201ENSMUST00000210122 547 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 AC158631.2-201ENSMUST00000219999 478 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col18a1P39061 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col18a1P39061 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col18a1P39061 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm44441-201ENSMUST00000203642 2475 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm24117-201ENSMUST00000103973 133 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm15443-201ENSMUST00000118947 820 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms