Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm24350-201ENSMUST00000104163 133 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm20549-201ENSMUST00000174804 429 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.45□□□□□ -1.38
Col1a1P11087 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm22456-201ENSMUST00000082578 125 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Gm25139-201ENSMUST00000083247 210 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col1a1P11087 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col1a1P11087 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
Col1a1P11087 Gm46191-201ENSMUST00000218899 433 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col1a1P11087 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col1a1P11087 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col1a1P11087 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col1a1P11087 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.44□□□□□ -1.38
Col1a1P11087 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm13679-201ENSMUST00000118678 484 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm13593-201ENSMUST00000121329 692 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm26170-201ENSMUST00000158419 148 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm27193-201ENSMUST00000184217 586 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm38040-201ENSMUST00000193505 225 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm43444-201ENSMUST00000198123 291 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm43919-201ENSMUST00000204303 364 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.43□□□□□ -1.38
Col1a1P11087 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col1a1P11087 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.43□□□□□ -1.38
Col1a1P11087 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col1a1P11087 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col1a1P11087 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col1a1P11087 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col1a1P11087 Gm11270-201ENSMUST00000117685 471 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 Gm11227-201ENSMUST00000119774 471 ntBASIC6.42□□□□□ -1.38
Col1a1P11087 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms