Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 AC133283.1-201ENSMUST00000228443 859 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm1966-201ENSMUST00000184540 7293 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm19093-201ENSMUST00000210671 1454 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scrt1Q99M85 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.98□□□□□ -1.61
Scrt1Q99M85 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scrt1Q99M85 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm13866-201ENSMUST00000118901 968 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm15480-201ENSMUST00000120442 519 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm12293-201ENSMUST00000121898 590 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Mir1945-201ENSMUST00000157919 78 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm17086-201ENSMUST00000171346 484 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm26731-201ENSMUST00000180683 543 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm8669-201ENSMUST00000183839 945 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm37560-201ENSMUST00000194289 1000 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm8412-201ENSMUST00000077493 440 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Mir30b-201ENSMUST00000083542 96 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 AC121870.1-201ENSMUST00000216279 4879 ntBASIC4.97□□□□□ -1.61
Scrt1Q99M85 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scrt1Q99M85 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Scrt1Q99M85 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Scrt1Q99M85 Gm43981-201ENSMUST00000203285 1467 ntBASIC4.96□□□□□ -1.62
Scrt1Q99M85 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.96□□□□□ -1.62
Scrt1Q99M85 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Scrt1Q99M85 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scrt1Q99M85 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scrt1Q99M85 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scrt1Q99M85 Gm25564-201ENSMUST00000104604 132 ntBASIC4.96□□□□□ -1.62
Scrt1Q99M85 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scrt1Q99M85 Gm13770-201ENSMUST00000117149 305 ntBASIC4.96□□□□□ -1.62
Scrt1Q99M85 Gm11485-201ENSMUST00000120048 1175 ntBASIC4.96□□□□□ -1.62
Scrt1Q99M85 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.96□□□□□ -1.62
Scrt1Q99M85 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms