Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm15493-201ENSMUST00000119461 528 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm12583-201ENSMUST00000120677 853 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm18343-201ENSMUST00000172802 604 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm20480-201ENSMUST00000173953 250 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim17Q7TPM3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Mir1188-201ENSMUST00000116756 120 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm11617-201ENSMUST00000119609 639 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm22698-201ENSMUST00000175375 108 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm20561-201ENSMUST00000188131 292 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm43744-201ENSMUST00000196387 688 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm44277-201ENSMUST00000205128 649 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim17Q7TPM3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Gm22276-201ENSMUST00000122469 129 ntBASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim17Q7TPM3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms