Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col2a1P28481 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Col2a1P28481 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Col2a1P28481 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm22266-201ENSMUST00000104011 138 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm23294-201ENSMUST00000104150 164 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm13363-201ENSMUST00000122008 522 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm25389-201ENSMUST00000157340 286 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm23537-201ENSMUST00000157536 330 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm25865-201ENSMUST00000158247 104 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm15838-201ENSMUST00000161575 180 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm26318-201ENSMUST00000176507 96 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm8669-201ENSMUST00000183839 945 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm9685-201ENSMUST00000211275 538 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm32526-201ENSMUST00000221878 981 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Col2a1P28481 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col2a1P28481 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm22456-201ENSMUST00000082578 125 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col2a1P28481 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col2a1P28481 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.27□□□□□ -1.41
Col2a1P28481 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col2a1P28481 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm14212-201ENSMUST00000122023 826 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Gm8941-201ENSMUST00000181451 899 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Mir6400-201ENSMUST00000184870 92 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col2a1P28481 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.26□□□□□ -1.41
Col2a1P28481 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col2a1P28481 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm17907-201ENSMUST00000173150 710 ntBASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.25□□□□□ -1.41
Col2a1P28481 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms