Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm11346-201ENSMUST00000118346 704 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm12322-201ENSMUST00000121605 389 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm25179-201ENSMUST00000122632 128 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm27820-201ENSMUST00000183628 175 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm9320-201ENSMUST00000184151 473 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm27551-201ENSMUST00000184258 77 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm8999-201ENSMUST00000204951 969 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm2607-201ENSMUST00000212389 627 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm23972-201ENSMUST00000083322 165 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col1a1P11087 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Col1a1P11087 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm7206-201ENSMUST00000117730 508 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm12654-201ENSMUST00000120387 587 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm22277-201ENSMUST00000157204 277 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm25865-201ENSMUST00000158247 104 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm17121-201ENSMUST00000170414 847 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm17222-201ENSMUST00000180135 847 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm18553-201ENSMUST00000194152 634 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm9038-201ENSMUST00000203400 604 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm5027-201ENSMUST00000206700 375 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Gm18259-201ENSMUST00000220991 2010 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.47□□□□□ -1.37
Col1a1P11087 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.47□□□□□ -1.37
Col1a1P11087 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col1a1P11087 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col1a1P11087 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.37
Col1a1P11087 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.37
Col1a1P11087 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
Col1a1P11087 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col1a1P11087 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col1a1P11087 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.46□□□□□ -1.37
Col1a1P11087 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col1a1P11087 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm37205-201ENSMUST00000194820 2736 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm24117-201ENSMUST00000103973 133 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col1a1P11087 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm3267-201ENSMUST00000118671 473 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm14998-201ENSMUST00000120502 495 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Col1a1P11087 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm29474-201ENSMUST00000187688 379 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm6362-201ENSMUST00000217686 836 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Gm19786-201ENSMUST00000222589 580 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.46□□□□□ -1.38
Col1a1P11087 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col1a1P11087 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.46□□□□□ -1.38
Col1a1P11087 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.45□□□□□ -1.38
Col1a1P11087 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Col1a1P11087 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col1a1P11087 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.45□□□□□ -1.38
Col1a1P11087 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms