Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm42776-201ENSMUST00000198031 406 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm45405-201ENSMUST00000211544 609 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm18587-201ENSMUST00000213736 841 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm23686-201ENSMUST00000083241 164 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Mir188-201ENSMUST00000083464 68 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm23795-201ENSMUST00000084006 137 ntBASIC5.73□□□□□ -1.49
Hoxa9P09631 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Hoxa9P09631 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.73□□□□□ -1.49
Hoxa9P09631 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Hoxa9P09631 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm22273-201ENSMUST00000104040 132 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm11894-201ENSMUST00000121579 328 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm7309-201ENSMUST00000121670 581 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm11200-201ENSMUST00000121698 448 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.72□□□□□ -1.49
Hoxa9P09631 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm7335-201ENSMUST00000172475 373 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm4617-201ENSMUST00000178993 331 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm33601-201ENSMUST00000210001 961 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Hoxa9P09631 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Hoxa9P09631 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.72□□□□□ -1.49
Hoxa9P09631 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Hoxa9P09631 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.71□□□□□ -1.49
Hoxa9P09631 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxa9P09631 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Hoxa9P09631 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.71□□□□□ -1.49
Hoxa9P09631 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.71□□□□□ -1.49
Hoxa9P09631 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Hoxa9P09631 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm25758-201ENSMUST00000103987 129 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm16200-201ENSMUST00000120385 331 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm22650-201ENSMUST00000175138 105 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm3307-201ENSMUST00000176164 632 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm22420-201ENSMUST00000178795 126 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm8321-201ENSMUST00000181691 980 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm28017-201ENSMUST00000183434 126 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Mir6539-201ENSMUST00000183732 110 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Mir6417-201ENSMUST00000183815 116 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm18427-201ENSMUST00000195422 515 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm29813-201ENSMUST00000195856 447 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm4602-201ENSMUST00000203198 308 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm44132-201ENSMUST00000205142 151 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm4587-201ENSMUST00000209135 637 ntBASIC5.71□□□□□ -1.5
Hoxa9P09631 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.71□□□□□ -1.5
Hoxa9P09631 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms