Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm17137-202ENSMUST00000165729 957 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm37189-201ENSMUST00000192131 298 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm37430-201ENSMUST00000193039 196 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm38217-201ENSMUST00000194358 910 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.38□□□□□ -1.55
Lsm1Q8VC85 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Lsm1Q8VC85 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Mir290a-201ENSMUST00000104627 83 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm12193-201ENSMUST00000117250 379 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm12618-201ENSMUST00000121754 483 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm23995-201ENSMUST00000158060 129 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm9006-201ENSMUST00000165520 841 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm26993-201ENSMUST00000182766 789 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm27148-201ENSMUST00000185086 160 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm18350-201ENSMUST00000187395 955 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm8419-201ENSMUST00000189886 412 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm37682-201ENSMUST00000191776 522 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm37024-201ENSMUST00000192224 868 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm5050-201ENSMUST00000197164 775 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm45700-201ENSMUST00000205866 347 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm45845-201ENSMUST00000207326 582 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm19880-201ENSMUST00000207731 318 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm44623-201ENSMUST00000207934 434 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm18467-201ENSMUST00000208805 434 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm45850-201ENSMUST00000212536 338 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm45722-201ENSMUST00000213075 466 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm5830-201ENSMUST00000049117 443 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm5612-201ENSMUST00000053326 375 ntBASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Lsm1Q8VC85 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms