Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Gm42874-201ENSMUST00000198888 1774 ntBASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a6Q8C6K9 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm13491-201ENSMUST00000118267 235 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm13679-201ENSMUST00000118678 484 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm12110-201ENSMUST00000121601 579 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm25605-201ENSMUST00000158364 124 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm17121-201ENSMUST00000170414 847 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm26318-201ENSMUST00000176507 96 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm17222-201ENSMUST00000180135 847 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm4822-201ENSMUST00000077551 479 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm4911-201ENSMUST00000119388 945 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm27754-201ENSMUST00000183340 126 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Gm45405-201ENSMUST00000211544 609 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Snord15b-201ENSMUST00000083032 145 ntBASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a6Q8C6K9 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm45520-201ENSMUST00000210109 2031 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm5834-201ENSMUST00000126680 1026 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm37882-201ENSMUST00000195254 196 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm9173-201ENSMUST00000198054 400 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Mir484-201ENSMUST00000093566 67 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm37033-201ENSMUST00000193199 7350 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm42613-201ENSMUST00000199975 1931 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 AC155298.1-201ENSMUST00000225350 3250 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm37186-201ENSMUST00000195629 2861 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm11826-201ENSMUST00000118781 438 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm25291-201ENSMUST00000122795 144 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm23327-201ENSMUST00000157420 78 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms