Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh19Q80TF3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh19Q80TF3 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir804-201ENSMUST00000103251 95 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm25943-201ENSMUST00000103791 90 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm23768-201ENSMUST00000104440 131 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm22771-201ENSMUST00000104449 91 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm15311-201ENSMUST00000119682 282 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm12837-201ENSMUST00000120131 373 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm15305-201ENSMUST00000120354 288 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm7973-201ENSMUST00000122107 488 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Snora81-201ENSMUST00000157310 178 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm24176-201ENSMUST00000158928 121 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm25285-201ENSMUST00000178951 90 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm29634-201ENSMUST00000188467 696 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm28699-201ENSMUST00000189193 696 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm36986-201ENSMUST00000195320 353 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm42594-201ENSMUST00000199511 246 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm7452-201ENSMUST00000200764 788 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm17834-201ENSMUST00000204322 891 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm3565-201ENSMUST00000222670 609 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm26111-201ENSMUST00000083969 106 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.71□□□□□ -1.34
Pcdh19Q80TF3 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm23133-201ENSMUST00000104255 135 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm12386-201ENSMUST00000117380 688 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm12370-201ENSMUST00000117809 604 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm12135-201ENSMUST00000119170 466 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Gm14887-201ENSMUST00000119522 663 ntBASIC6.7□□□□□ -1.34
Pcdh19Q80TF3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms