Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm37495-201ENSMUST00000194590 264 ntBASIC5.63□□□□□ -1.51
HttP42859 Gm45084-201ENSMUST00000207096 1957 ntBASIC5.63□□□□□ -1.51
HttP42859 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HttP42859 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Gm16007-201ENSMUST00000117837 286 ntBASIC5.62□□□□□ -1.51
HttP42859 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.62□□□□□ -1.51
HttP42859 Gm5842-201ENSMUST00000195073 622 ntBASIC5.62□□□□□ -1.51
HttP42859 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.62□□□□□ -1.51
HttP42859 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
HttP42859 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
HttP42859 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.62□□□□□ -1.51
HttP42859 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Mir6416-201ENSMUST00000183664 117 ntBASIC5.62□□□□□ -1.51
HttP42859 Gm37884-201ENSMUST00000191857 818 ntBASIC5.62□□□□□ -1.51
HttP42859 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.62□□□□□ -1.51
HttP42859 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HttP42859 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HttP42859 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.62□□□□□ -1.51
HttP42859 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HttP42859 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HttP42859 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.61□□□□□ -1.51
HttP42859 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.61□□□□□ -1.51
HttP42859 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm11484-201ENSMUST00000119808 338 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Gm2623-201ENSMUST00000199229 286 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HttP42859 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HttP42859 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HttP42859 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HttP42859 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.61□□□□□ -1.51
HttP42859 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm8599-201ENSMUST00000193033 457 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.61□□□□□ -1.51
HttP42859 Gm45226-201ENSMUST00000206602 288 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.61□□□□□ -1.51
HttP42859 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.61□□□□□ -1.51
HttP42859 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
HttP42859 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Gm25564-201ENSMUST00000104604 132 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm8202-201ENSMUST00000117682 310 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm26486-201ENSMUST00000158021 110 ntBASIC5.61□□□□□ -1.51
HttP42859 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.61□□□□□ -1.51
HttP42859 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Gm43604-201ENSMUST00000199799 705 ntBASIC5.61□□□□□ -1.51
HttP42859 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Gm24763-201ENSMUST00000083688 190 ntBASIC5.61□□□□□ -1.51
HttP42859 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms