Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm26371-201ENSMUST00000157829 104 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm16531-201ENSMUST00000180658 967 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm27460-201ENSMUST00000184213 100 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm43491-201ENSMUST00000197133 784 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm42776-201ENSMUST00000198031 406 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm43295-201ENSMUST00000201439 412 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm31861-201ENSMUST00000204563 672 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm9685-201ENSMUST00000211275 538 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 BC023105-201ENSMUST00000073997 1227 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm13440-201ENSMUST00000121665 496 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm4660-201ENSMUST00000131499 403 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm16129-201ENSMUST00000152628 486 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm25971-201ENSMUST00000158953 286 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm44038-201ENSMUST00000203952 889 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm44830-201ENSMUST00000207667 584 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm18944-201ENSMUST00000207672 643 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm46223-201ENSMUST00000215196 675 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Mir143-201ENSMUST00000083511 63 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm23102-201ENSMUST00000083724 116 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gm23795-201ENSMUST00000084006 137 ntBASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Brf1Q8CFK2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm24886-201ENSMUST00000104384 123 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms