Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 Gm44307-201ENSMUST00000204466 764 ntBASIC8.86□□□□□ -0.99
PtprkP35822 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.86□□□□□ -0.99
PtprkP35822 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC8.86□□□□□ -0.99
PtprkP35822 CT025665.1-201ENSMUST00000215251 1199 ntBASIC8.86□□□□□ -0.99
PtprkP35822 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.86□□□□□ -0.99
PtprkP35822 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC8.86□□□□□ -0.99
PtprkP35822 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
PtprkP35822 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.86□□□□□ -0.99
PtprkP35822 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC8.86□□□□□ -0.99
PtprkP35822 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
PtprkP35822 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
PtprkP35822 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC8.85□□□□□ -0.99
PtprkP35822 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Gm25278-201ENSMUST00000157267 120 ntBASIC8.85□□□□□ -0.99
PtprkP35822 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.85□□□□□ -0.99
PtprkP35822 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
PtprkP35822 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 AC154576.2-203ENSMUST00000224736 253 ntBASIC8.85□□□□□ -0.99
PtprkP35822 AC113269.1-201ENSMUST00000227185 674 ntBASIC8.85□□□□□ -0.99
PtprkP35822 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
PtprkP35822 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
PtprkP35822 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
PtprkP35822 Gm14367-201ENSMUST00000119214 1497 ntBASIC8.85□□□□□ -0.99
PtprkP35822 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
PtprkP35822 Gm23692-201ENSMUST00000101881 160 ntBASIC8.84□□□□□ -0.99
PtprkP35822 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
PtprkP35822 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Gm27551-201ENSMUST00000184258 77 ntBASIC8.84□□□□□ -0.99
PtprkP35822 Gm4854-201ENSMUST00000185902 574 ntBASIC8.84□□□□□ -0.99
PtprkP35822 Gm29474-201ENSMUST00000187688 379 ntBASIC8.84□□□□□ -0.99
PtprkP35822 Gm37882-201ENSMUST00000195254 196 ntBASIC8.84□□□□□ -0.99
PtprkP35822 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PtprkP35822 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PtprkP35822 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 Igkv11-106-201ENSMUST00000103331 346 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm23274-201ENSMUST00000104056 130 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm11912-201ENSMUST00000117235 264 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm13213-201ENSMUST00000119668 474 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm12466-201ENSMUST00000121199 620 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm25865-201ENSMUST00000158247 104 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm10784-201ENSMUST00000178715 238 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm27834-201ENSMUST00000183427 125 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm27148-201ENSMUST00000185086 160 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm2914-201ENSMUST00000186120 328 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm9038-201ENSMUST00000203400 604 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC8.83□□□□□ -1
PtprkP35822 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.83□□□□□ -1
PtprkP35822 Gm7128-201ENSMUST00000211639 533 ntBASIC8.83□□□□□ -1
PtprkP35822 AC158523.2-201ENSMUST00000222708 548 ntBASIC8.83□□□□□ -1
PtprkP35822 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC8.83□□□□□ -1
PtprkP35822 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
PtprkP35822 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.83□□□□□ -1
PtprkP35822 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PtprkP35822 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC8.83□□□□□ -1
PtprkP35822 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.83□□□□□ -1
PtprkP35822 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PtprkP35822 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC8.83□□□□□ -1
PtprkP35822 Gm14998-201ENSMUST00000120502 495 ntBASIC8.83□□□□□ -1
PtprkP35822 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC8.83□□□□□ -1
PtprkP35822 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC8.83□□□□□ -1
PtprkP35822 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PtprkP35822 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC8.83□□□□□ -1
PtprkP35822 CT030194.1-201ENSMUST00000225507 532 ntBASIC8.83□□□□□ -1
PtprkP35822 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -1
PtprkP35822 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC8.82□□□□□ -1
PtprkP35822 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
PtprkP35822 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PtprkP35822 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC8.82□□□□□ -1
PtprkP35822 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.82□□□□□ -1
PtprkP35822 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PtprkP35822 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PtprkP35822 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PtprkP35822 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms