Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm7670-201ENSMUST00000121272 641 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.32□□□□□ -1.4
Col2a1P28481 Scarna13-201ENSMUST00000158164 275 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm44330-201ENSMUST00000200106 143 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm45870-201ENSMUST00000211269 601 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.32□□□□□ -1.4
Col2a1P28481 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col2a1P28481 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.32□□□□□ -1.4
Col2a1P28481 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Col2a1P28481 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.31□□□□□ -1.4
Col2a1P28481 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col2a1P28481 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm43712-201ENSMUST00000198020 291 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm45215-201ENSMUST00000206407 395 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col2a1P28481 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.31□□□□□ -1.4
Col2a1P28481 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm40598-201ENSMUST00000222953 547 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col2a1P28481 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col2a1P28481 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.31□□□□□ -1.4
Col2a1P28481 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Gm26814-201ENSMUST00000181178 4149 ntBASIC6.31□□□□□ -1.4
Col2a1P28481 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col2a1P28481 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col2a1P28481 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm3931-201ENSMUST00000119038 455 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm14175-201ENSMUST00000119835 241 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm15803-201ENSMUST00000120118 394 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.3□□□□□ -1.4
Col2a1P28481 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm7316-201ENSMUST00000165395 445 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms