Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm11506-201ENSMUST00000122414 470 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm26069-201ENSMUST00000157497 277 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm25572-201ENSMUST00000157527 172 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm46998-201ENSMUST00000221444 330 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm27492-201ENSMUST00000185194 187 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC5.33□□□□□ -1.56
Col6a3E9PWQ3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm22266-201ENSMUST00000104011 138 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm11622-201ENSMUST00000120525 691 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm44485-201ENSMUST00000199569 137 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC107453.1-201ENSMUST00000227490 3268 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm15754-201ENSMUST00000119191 478 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a3E9PWQ3 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm26248-201ENSMUST00000116700 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm26137-201ENSMUST00000116701 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm26190-201ENSMUST00000116704 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24617-201ENSMUST00000116705 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25778-201ENSMUST00000116713 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25774-201ENSMUST00000116717 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22102-201ENSMUST00000116730 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23177-201ENSMUST00000116784 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24193-201ENSMUST00000116801 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24744-201ENSMUST00000116833 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24427-201ENSMUST00000116896 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22346-201ENSMUST00000116918 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23606-201ENSMUST00000116938 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22029-201ENSMUST00000116940 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm26298-201ENSMUST00000116956 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23844-201ENSMUST00000116959 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24484-201ENSMUST00000117009 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25347-201ENSMUST00000117026 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22112-201ENSMUST00000117032 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25817-201ENSMUST00000177758 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22991-201ENSMUST00000178126 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25754-201ENSMUST00000178653 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22419-201ENSMUST00000178780 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24802-201ENSMUST00000178897 121 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms