Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.71□□□□□ -1.66
Gm3550W4VSN7 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Gm3550W4VSN7 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Mir546-201ENSMUST00000102105 121 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm26300-201ENSMUST00000102282 94 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm5405-201ENSMUST00000120478 609 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm26170-201ENSMUST00000158419 148 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Scarna10-201ENSMUST00000158992 325 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm10177-201ENSMUST00000160052 444 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm26970-201ENSMUST00000182990 964 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm31861-201ENSMUST00000204563 672 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm45405-201ENSMUST00000211544 609 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm32526-201ENSMUST00000221878 981 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 AC137871.3-201ENSMUST00000226628 225 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.7□□□□□ -1.66
Gm3550W4VSN7 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm8545-201ENSMUST00000120692 801 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm8761-201ENSMUST00000121507 955 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm11679-201ENSMUST00000121830 779 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm6223-201ENSMUST00000178436 871 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm16531-201ENSMUST00000180658 967 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm37024-201ENSMUST00000192224 868 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm29745-201ENSMUST00000198005 687 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm19880-201ENSMUST00000207731 318 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm7499-201ENSMUST00000210423 813 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm8137-201ENSMUST00000218997 463 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Mir375-201ENSMUST00000083682 64 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm17165-201ENSMUST00000096155 493 ntBASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.69□□□□□ -1.66
Gm3550W4VSN7 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms