Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm42976-201ENSMUST00000200313 222 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Clec2j-202ENSMUST00000203658 606 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm45269-201ENSMUST00000210359 282 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm45448-201ENSMUST00000211739 209 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm24035-201ENSMUST00000082867 107 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm25739-201ENSMUST00000082886 107 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 AC164297.4-201ENSMUST00000224225 1307 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H2afb3S4R1G7 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm14489-201ENSMUST00000120868 901 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm15696-201ENSMUST00000121730 445 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm23162-201ENSMUST00000175081 121 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Mir6362-201ENSMUST00000184329 107 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm5309-201ENSMUST00000197416 677 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm42464-202ENSMUST00000198111 774 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm18748-201ENSMUST00000198507 622 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm31211-201ENSMUST00000199170 253 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm42796-201ENSMUST00000199913 1087 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm18537-201ENSMUST00000205709 989 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AC125464.1-201ENSMUST00000228013 512 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm23624-201ENSMUST00000082463 321 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm25099-201ENSMUST00000093716 116 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms