Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm14335-201ENSMUST00000119165 810 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm15331-201ENSMUST00000120225 385 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm11990-201ENSMUST00000121505 897 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm17091-201ENSMUST00000163248 357 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm37196-201ENSMUST00000194762 906 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm7890-201ENSMUST00000204877 601 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm17988-201ENSMUST00000208796 535 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm6850-201ENSMUST00000210031 530 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm36501-201ENSMUST00000221857 745 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Vps53Q8CCB4 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm15018-201ENSMUST00000117090 633 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm12677-201ENSMUST00000118668 426 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm13245-201ENSMUST00000119646 260 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm12308-201ENSMUST00000120440 389 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm4831-201ENSMUST00000174626 594 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Mir6992-201ENSMUST00000183342 109 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm27193-201ENSMUST00000184217 586 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm38268-201ENSMUST00000195813 193 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm19182-201ENSMUST00000207139 577 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 AC153544.1-201ENSMUST00000217988 400 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm18242-201ENSMUST00000218455 542 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm18405-201ENSMUST00000220743 511 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm8412-201ENSMUST00000077493 440 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm24041-201ENSMUST00000083115 156 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Mir412-201ENSMUST00000083636 80 ntBASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vps53Q8CCB4 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms