Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Znf48Q3US17 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.27□□□□□ -1.41
Znf48Q3US17 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Znf48Q3US17 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Znf48Q3US17 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Znf48Q3US17 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Mir297a-2-201ENSMUST00000103795 90 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm5752-201ENSMUST00000117771 594 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm15333-201ENSMUST00000118825 364 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm15129-201ENSMUST00000119673 279 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm14998-201ENSMUST00000120502 495 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm14186-201ENSMUST00000120804 137 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm12642-201ENSMUST00000121098 876 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm6434-201ENSMUST00000163316 372 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm4134-201ENSMUST00000173244 563 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm23639-201ENSMUST00000175078 132 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm26426-201ENSMUST00000177866 123 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm26060-201ENSMUST00000180094 123 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm9457-201ENSMUST00000180176 372 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm25873-201ENSMUST00000180317 107 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm27185-201ENSMUST00000184296 247 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm27596-201ENSMUST00000185061 83 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm17916-202ENSMUST00000187634 1187 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm5734-201ENSMUST00000189787 913 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm26413-201ENSMUST00000196783 126 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.26□□□□□ -1.41
Znf48Q3US17 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 AL669916.3-201ENSMUST00000213855 94 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 AL669916.6-201ENSMUST00000214610 94 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 AL669916.4-201ENSMUST00000215976 94 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm3442-201ENSMUST00000216808 710 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm20734-201ENSMUST00000216939 193 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 AL669916.1-201ENSMUST00000217640 94 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.26□□□□□ -1.41
Znf48Q3US17 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.26□□□□□ -1.41
Znf48Q3US17 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Znf48Q3US17 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Znf48Q3US17 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Znf48Q3US17 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.25□□□□□ -1.41
Znf48Q3US17 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Znf48Q3US17 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Znf48Q3US17 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Znf48Q3US17 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.25□□□□□ -1.41
Znf48Q3US17 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Znf48Q3US17 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Znf48Q3US17 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms