Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC8.83□□□□□ -1
Col17a1Q07563 AC165953.1-201ENSMUST00000226386 357 ntBASIC8.83□□□□□ -1
Col17a1Q07563 AC112142.1-206ENSMUST00000228136 982 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 n-R5s89-201ENSMUST00000083532 104 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col17a1Q07563 Gm14628-201ENSMUST00000117508 635 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm12755-201ENSMUST00000122297 282 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm37684-201ENSMUST00000192779 355 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC8.83□□□□□ -1
Col17a1Q07563 Gm6906-201ENSMUST00000218014 569 ntBASIC8.83□□□□□ -1
Col17a1Q07563 AC154851.1-201ENSMUST00000221591 655 ntBASIC8.83□□□□□ -1
Col17a1Q07563 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.83□□□□□ -1
Col17a1Q07563 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Gm23928-201ENSMUST00000082469 145 ntBASIC8.83□□□□□ -1
Col17a1Q07563 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Col17a1Q07563 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col17a1Q07563 AC152944.1-201ENSMUST00000220160 3101 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.82□□□□□ -1
Col17a1Q07563 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Col17a1Q07563 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Col17a1Q07563 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Gm11510-201ENSMUST00000120278 347 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Gm15905-201ENSMUST00000137042 298 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.82□□□□□ -1
Col17a1Q07563 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC8.82□□□□□ -1
Col17a1Q07563 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col17a1Q07563 Gm5511-201ENSMUST00000189380 802 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC8.82□□□□□ -1
Col17a1Q07563 Gm9173-201ENSMUST00000198054 400 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Gm43550-201ENSMUST00000200597 303 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Gm44281-201ENSMUST00000203090 166 ntBASIC8.82□□□□□ -1
Col17a1Q07563 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC8.82□□□□□ -1
Col17a1Q07563 AC168059.2-201ENSMUST00000224473 333 ntBASIC8.82□□□□□ -1
Col17a1Q07563 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.82□□□□□ -1
Col17a1Q07563 AC154576.2-203ENSMUST00000224736 253 ntBASIC8.82□□□□□ -1
Col17a1Q07563 AC132112.1-201ENSMUST00000226354 505 ntBASIC8.82□□□□□ -1
Col17a1Q07563 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.82□□□□□ -1
Col17a1Q07563 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col17a1Q07563 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
Col17a1Q07563 Gm42600-201ENSMUST00000202081 3588 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col17a1Q07563 Gm43793-201ENSMUST00000201645 1333 ntBASIC8.81□□□□□ -1
Col17a1Q07563 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Gm23485-201ENSMUST00000104181 155 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm23608-201ENSMUST00000104545 128 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm24590-201ENSMUST00000116699 119 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm11990-201ENSMUST00000121505 897 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC8.81□□□□□ -1
Col17a1Q07563 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Gm37857-201ENSMUST00000191784 1199 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm37576-201ENSMUST00000194228 372 ntBASIC8.81□□□□□ -1
Col17a1Q07563 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Gm44673-201ENSMUST00000205692 996 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm44845-201ENSMUST00000208773 335 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC8.81□□□□□ -1
Col17a1Q07563 AC154198.1-201ENSMUST00000222839 424 ntBASIC8.81□□□□□ -1
Col17a1Q07563 CT025538.2-201ENSMUST00000226083 772 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col17a1Q07563 Gm25592-201ENSMUST00000082635 131 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.81□□□□□ -1
Col17a1Q07563 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Col17a1Q07563 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms