Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.63□□□□□ -1.67
Col8a2P25318 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a2P25318 Gm17044-201ENSMUST00000168549 828 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Mir5103-201ENSMUST00000175111 79 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm4845-201ENSMUST00000179202 562 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.63□□□□□ -1.67
Col8a2P25318 Mir6539-201ENSMUST00000183732 110 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm27355-201ENSMUST00000185045 128 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.63□□□□□ -1.67
Col8a2P25318 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.63□□□□□ -1.67
Col8a2P25318 Gm21461-201ENSMUST00000200382 863 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm44795-201ENSMUST00000205496 319 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm18541-201ENSMUST00000215935 538 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Gm18940-201ENSMUST00000222518 871 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.63□□□□□ -1.67
Col8a2P25318 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Col8a2P25318 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a2P25318 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a2P25318 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a2P25318 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.63□□□□□ -1.67
Col8a2P25318 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a2P25318 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a2P25318 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a2P25318 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col8a2P25318 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col8a2P25318 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm43577-201ENSMUST00000197090 3344 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm42994-201ENSMUST00000195964 2549 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm24265-201ENSMUST00000101833 141 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm15531-201ENSMUST00000118062 252 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm14871-201ENSMUST00000119056 194 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm25291-201ENSMUST00000122795 144 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm25824-201ENSMUST00000157092 121 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm22122-201ENSMUST00000175147 200 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm23872-201ENSMUST00000175432 77 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm22411-201ENSMUST00000175462 126 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm22002-201ENSMUST00000175622 125 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm24407-201ENSMUST00000177864 141 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm37336-202ENSMUST00000193705 468 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm43390-201ENSMUST00000196614 421 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Gm18702-201ENSMUST00000196923 588 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a2P25318 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 AC113269.1-201ENSMUST00000227185 674 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.62□□□□□ -1.67
Col8a2P25318 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a2P25318 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col8a2P25318 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a2P25318 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.61□□□□□ -1.67
Col8a2P25318 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC4.61□□□□□ -1.67
Col8a2P25318 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms