Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm24888-201ENSMUST00000104387 130 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm13983-201ENSMUST00000118018 865 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm14614-201ENSMUST00000119873 384 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm13751-201ENSMUST00000120280 752 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm15379-201ENSMUST00000121224 648 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm22390-201ENSMUST00000157588 325 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm7346-201ENSMUST00000169661 476 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm22252-201ENSMUST00000179316 79 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm26570-201ENSMUST00000180672 342 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Mir7220-201ENSMUST00000183978 60 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm29259-201ENSMUST00000186396 694 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm21654-201ENSMUST00000188086 691 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm37946-201ENSMUST00000192064 347 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm37135-201ENSMUST00000192652 534 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm43096-201ENSMUST00000196173 421 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm7463-201ENSMUST00000201541 547 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm43973-201ENSMUST00000203562 210 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm45448-201ENSMUST00000211739 209 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm18228-201ENSMUST00000217297 1091 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm9110-201ENSMUST00000219035 617 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm18704-201ENSMUST00000219736 446 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm25587-201ENSMUST00000082498 166 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm22126-201ENSMUST00000083244 142 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm10794-201ENSMUST00000099624 207 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nkx6-1Q99MA9 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Mir804-201ENSMUST00000103251 95 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm11484-201ENSMUST00000119808 338 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm14202-201ENSMUST00000120121 311 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm13555-201ENSMUST00000121668 319 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm6568-201ENSMUST00000122274 697 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm5401-201ENSMUST00000122444 365 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm18833-201ENSMUST00000173218 862 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm20401-201ENSMUST00000173717 212 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm27018-201ENSMUST00000181136 225 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm37193-201ENSMUST00000193087 513 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm43578-201ENSMUST00000201250 459 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms