Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm25758-201ENSMUST00000103987 129 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm24855-201ENSMUST00000104848 97 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm15560-201ENSMUST00000117107 643 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm25826-201ENSMUST00000157090 137 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm24940-201ENSMUST00000158326 108 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm8358-201ENSMUST00000167222 555 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm22993-201ENSMUST00000175423 254 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm9499-201ENSMUST00000180888 964 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm28429-201ENSMUST00000188521 363 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm37774-201ENSMUST00000194401 245 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm36378-201ENSMUST00000201709 388 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm44132-201ENSMUST00000205142 151 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scrt1Q99M85 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm15490-201ENSMUST00000119894 387 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm13488-201ENSMUST00000120419 179 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm15044-201ENSMUST00000120703 598 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm26312-201ENSMUST00000157769 165 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Mir6343-201ENSMUST00000183584 84 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm43554-201ENSMUST00000199987 186 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm45733-201ENSMUST00000212988 437 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm5229-201ENSMUST00000039375 354 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.04□□□□□ -1.6
Scrt1Q99M85 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms