Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Clcn1Q64347 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.87□□□□□ -0.99
Clcn1Q64347 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Clcn1Q64347 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.87□□□□□ -0.99
Clcn1Q64347 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Clcn1Q64347 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Mir697-201ENSMUST00000102316 109 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm15988-201ENSMUST00000118677 367 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm15971-201ENSMUST00000119372 211 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm13409-201ENSMUST00000122072 546 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm15501-202ENSMUST00000140687 625 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC8.86□□□□□ -0.99
Clcn1Q64347 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm9167-201ENSMUST00000182469 962 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm5116-201ENSMUST00000187732 463 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm29627-201ENSMUST00000187984 463 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm8861-201ENSMUST00000196346 832 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm18867-201ENSMUST00000198022 1179 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm5288-201ENSMUST00000198323 1119 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm17987-201ENSMUST00000206902 603 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm7368-201ENSMUST00000213307 367 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm18729-201ENSMUST00000217230 621 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 AC166263.1-201ENSMUST00000218586 238 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm2840-201ENSMUST00000048361 411 ntBASIC8.86□□□□□ -0.99
Clcn1Q64347 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Clcn1Q64347 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Clcn1Q64347 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Mir674-201ENSMUST00000102421 100 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm22267-201ENSMUST00000104008 131 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm2199-201ENSMUST00000119065 874 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm14638-201ENSMUST00000121338 216 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm11363-201ENSMUST00000121672 548 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm15696-201ENSMUST00000121730 445 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm24383-201ENSMUST00000122691 333 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Clcn1Q64347 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm22841-201ENSMUST00000158443 62 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm6074-201ENSMUST00000193340 451 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm37586-201ENSMUST00000193654 204 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm2314-201ENSMUST00000200391 586 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.85□□□□□ -0.99
Clcn1Q64347 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC8.85□□□□□ -0.99
Clcn1Q64347 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms