Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm11737-201ENSMUST00000118713 468 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Mir3095-201ENSMUST00000175552 87 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm27855-201ENSMUST00000184122 128 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm38131-201ENSMUST00000192449 430 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm43516-201ENSMUST00000196891 322 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm4032-201ENSMUST00000210886 487 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm45870-201ENSMUST00000211269 601 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upf3bQ3ULL6 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm13311-201ENSMUST00000117863 379 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm15078-201ENSMUST00000118371 782 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm22518-201ENSMUST00000158267 68 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm3170-201ENSMUST00000168753 850 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm3348-201ENSMUST00000177813 850 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm23450-201ENSMUST00000178285 91 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm27887-201ENSMUST00000184367 102 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm3605-201ENSMUST00000185858 440 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm8920-201ENSMUST00000196153 924 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Mir219c-201ENSMUST00000199860 60 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm34149-201ENSMUST00000203547 304 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Upf3bQ3ULL6 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Upf3bQ3ULL6 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms