Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm38328-201ENSMUST00000195582 317 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm44412-201ENSMUST00000203018 294 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm43929-201ENSMUST00000203025 409 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm45845-201ENSMUST00000207326 582 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm45185-201ENSMUST00000207556 404 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rpl39P62892 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 AC069561.1-201ENSMUST00000213750 424 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 AC154627.3-201ENSMUST00000228441 334 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Rpl39P62892 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Rpl39P62892 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rpl39P62892 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Rpl39P62892 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm37760-201ENSMUST00000194726 3841 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Rpl39P62892 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rpl39P62892 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rpl39P62892 Gm43842-201ENSMUST00000202890 2982 ntBASIC3.81□□□□□ -1.8
Rpl39P62892 Gm8980-201ENSMUST00000140232 2197 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm38105-201ENSMUST00000192112 2621 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpl39P62892 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm43283-201ENSMUST00000199138 2548 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm24272-201ENSMUST00000102329 98 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm15754-201ENSMUST00000119191 478 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm11761-201ENSMUST00000121392 445 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm23883-201ENSMUST00000122686 290 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm20519-201ENSMUST00000173684 359 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm27820-201ENSMUST00000183628 175 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm27348-201ENSMUST00000184511 170 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm37030-201ENSMUST00000194254 295 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm5694-201ENSMUST00000195648 641 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm44307-201ENSMUST00000204466 764 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm45596-201ENSMUST00000209279 434 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm6362-201ENSMUST00000217686 836 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm4263-201ENSMUST00000220693 1101 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 AC126685.1-201ENSMUST00000221001 121 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 AC154636.1-201ENSMUST00000223226 126 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 AC154642.1-201ENSMUST00000224173 740 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpl39P62892 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpl39P62892 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Zscan4a-201ENSMUST00000210573 2279 ntBASIC3.8□□□□□ -1.8
Rpl39P62892 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Rpl39P62892 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Rpl39P62892 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rpl39P62892 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Rpl39P62892 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Rpl39P62892 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Rpl39P62892 Gm43333-201ENSMUST00000198340 2262 ntBASIC3.79□□□□□ -1.8
Rpl39P62892 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rpl39P62892 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.79□□□□□ -1.8
Rpl39P62892 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rpl39P62892 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rpl39P62892 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rpl39P62892 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rpl39P62892 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rpl39P62892 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rpl39P62892 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rpl39P62892 n-R5s178-201ENSMUST00000104249 114 ntBASIC3.79□□□□□ -1.8
Rpl39P62892 Gm12245-201ENSMUST00000117266 357 ntBASIC3.79□□□□□ -1.8
Rpl39P62892 Gm12939-201ENSMUST00000117303 165 ntBASIC3.79□□□□□ -1.8
Rpl39P62892 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC3.79□□□□□ -1.8
Rpl39P62892 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms