Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.17□□□□□ -1.58
Foxa1P35582 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Foxa1P35582 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.17□□□□□ -1.58
Foxa1P35582 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.17□□□□□ -1.58
Foxa1P35582 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.17□□□□□ -1.58
Foxa1P35582 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.17□□□□□ -1.58
Foxa1P35582 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Foxa1P35582 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.17□□□□□ -1.58
Foxa1P35582 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Foxa1P35582 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Foxa1P35582 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.17□□□□□ -1.58
Foxa1P35582 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Foxa1P35582 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Foxa1P35582 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm14620-201ENSMUST00000120656 383 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm11679-201ENSMUST00000121830 779 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.16□□□□□ -1.58
Foxa1P35582 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm23450-201ENSMUST00000178285 91 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm27887-201ENSMUST00000184367 102 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm38131-201ENSMUST00000192449 430 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm43516-201ENSMUST00000196891 322 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm18702-201ENSMUST00000196923 588 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Mir219c-201ENSMUST00000199860 60 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm43456-201ENSMUST00000202519 457 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm4032-201ENSMUST00000210886 487 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Foxa1P35582 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Foxa1P35582 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Foxa1P35582 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.16□□□□□ -1.58
Foxa1P35582 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Foxa1P35582 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Foxa1P35582 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.15□□□□□ -1.58
Foxa1P35582 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Foxa1P35582 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.15□□□□□ -1.58
Foxa1P35582 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.15□□□□□ -1.58
Foxa1P35582 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.15□□□□□ -1.58
Foxa1P35582 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Foxa1P35582 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Foxa1P35582 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Foxa1P35582 Mir546-201ENSMUST00000102105 121 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Foxa1P35582 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Foxa1P35582 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.15□□□□□ -1.59
Foxa1P35582 Mir1903-201ENSMUST00000122574 80 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.15□□□□□ -1.59
Foxa1P35582 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.15□□□□□ -1.59
Foxa1P35582 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Foxa1P35582 Gm23539-201ENSMUST00000157537 224 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm22518-201ENSMUST00000158267 68 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm23774-201ENSMUST00000158990 131 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm3076-201ENSMUST00000161613 451 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm23872-201ENSMUST00000175432 77 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Foxa1P35582 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Foxa1P35582 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm21654-201ENSMUST00000188086 691 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm8419-201ENSMUST00000189886 412 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Gm38185-201ENSMUST00000193195 694 ntBASIC5.15□□□□□ -1.59
Foxa1P35582 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms