Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Usp4P35123 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.55□□□□□ -1.36
Usp4P35123 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.55□□□□□ -1.36
Usp4P35123 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp4P35123 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp4P35123 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp4P35123 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Usp4P35123 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Usp4P35123 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Usp4P35123 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp4P35123 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.55□□□□□ -1.36
Usp4P35123 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Usp4P35123 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Usp4P35123 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm24590-201ENSMUST00000116699 119 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm14610-201ENSMUST00000118358 966 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm12387-201ENSMUST00000118573 955 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm25244-201ENSMUST00000178089 132 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm29525-201ENSMUST00000189844 699 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm29523-201ENSMUST00000191415 699 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm7299-201ENSMUST00000194441 581 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.54□□□□□ -1.36
Usp4P35123 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm9373-201ENSMUST00000208724 599 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.54□□□□□ -1.36
Usp4P35123 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.54□□□□□ -1.36
Usp4P35123 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.54□□□□□ -1.36
Usp4P35123 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm7557-201ENSMUST00000221935 865 ntBASIC6.54□□□□□ -1.36
Usp4P35123 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.54□□□□□ -1.36
Usp4P35123 AC160962.2-201ENSMUST00000224761 632 ntBASIC6.54□□□□□ -1.36
Usp4P35123 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Mir463-201ENSMUST00000093570 75 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Usp4P35123 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.54□□□□□ -1.36
Usp4P35123 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.54□□□□□ -1.36
Usp4P35123 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.54□□□□□ -1.36
Usp4P35123 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp4P35123 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp4P35123 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.53□□□□□ -1.36
Usp4P35123 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp4P35123 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp4P35123 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp4P35123 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Usp4P35123 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp4P35123 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.53□□□□□ -1.36
Usp4P35123 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp4P35123 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp4P35123 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp4P35123 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp4P35123 Gm22953-201ENSMUST00000116724 101 ntBASIC6.53□□□□□ -1.36
Usp4P35123 Gm12392-201ENSMUST00000118014 938 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms