Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm23546-201ENSMUST00000158211 137 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm4831-201ENSMUST00000174626 594 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col2a1P28481 Mir6343-201ENSMUST00000183584 84 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm29489-201ENSMUST00000188934 324 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.37□□□□□ -1.39
Col2a1P28481 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col2a1P28481 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
Col2a1P28481 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm15766-201ENSMUST00000118025 813 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm14769-201ENSMUST00000118590 432 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm15120-201ENSMUST00000120602 301 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm44456-201ENSMUST00000196554 89 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm18007-201ENSMUST00000205019 844 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm17984-201ENSMUST00000205286 859 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm10652-201ENSMUST00000199790 2622 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Robo2-210ENSMUST00000226478 8059 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col2a1P28481 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Col2a1P28481 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col2a1P28481 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.36□□□□□ -1.39
Col2a1P28481 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.35□□□□□ -1.39
Col2a1P28481 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Col2a1P28481 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col2a1P28481 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm5946-201ENSMUST00000182340 970 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm37421-201ENSMUST00000193088 132 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm43629-201ENSMUST00000201782 704 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm45635-201ENSMUST00000211516 2134 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.35□□□□□ -1.39
Col2a1P28481 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms