Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a1P02463 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Col4a1P02463 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm11987-201ENSMUST00000118524 381 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a1P02463 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a1P02463 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a1P02463 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col4a1P02463 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm24789-201ENSMUST00000104282 131 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Gm12007-201ENSMUST00000120978 597 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Gm23327-201ENSMUST00000157420 78 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm27528-201ENSMUST00000183544 205 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.73□□□□□ -1.33
Col4a1P02463 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Gm22741-201ENSMUST00000083438 165 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.73□□□□□ -1.33
Col4a1P02463 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col4a1P02463 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col4a1P02463 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.73□□□□□ -1.33
Col4a1P02463 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col4a1P02463 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.72□□□□□ -1.33
Col4a1P02463 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col4a1P02463 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm20519-201ENSMUST00000173684 359 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Gm29240-201ENSMUST00000187248 286 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Gm42776-201ENSMUST00000198031 406 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.72□□□□□ -1.33
Col4a1P02463 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col4a1P02463 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col4a1P02463 Gm37040-201ENSMUST00000191740 1824 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.72□□□□□ -1.33
Col4a1P02463 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col4a1P02463 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm24160-201ENSMUST00000104594 126 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm14995-201ENSMUST00000117135 391 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm16149-201ENSMUST00000117631 309 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm15480-201ENSMUST00000120442 519 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.71□□□□□ -1.33
Col4a1P02463 Mir6516-201ENSMUST00000196236 110 ntBASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms