Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb2S4R1M3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
H2afb2S4R1M3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afb2S4R1M3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Flg-201ENSMUST00000050758 1488 ntBASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.88■□□□□ 0.45
H2afb2S4R1M3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb2S4R1M3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb2S4R1M3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.86■□□□□ 0.45
H2afb2S4R1M3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb2S4R1M3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb2S4R1M3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb2S4R1M3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms