Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdpk1Q9Z2A0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdpk1Q9Z2A0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdpk1Q9Z2A0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pdpk1Q9Z2A0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdpk1Q9Z2A0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pdpk1Q9Z2A0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pdpk1Q9Z2A0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdpk1Q9Z2A0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdpk1Q9Z2A0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Pdpk1Q9Z2A0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms