Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Timm23-208ENSMUST00000226683 750 ntBASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.41■□□□□ 0.7
Nr1h3Q9Z0Y9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Odf3b-204ENSMUST00000227834 930 ntBASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr1h3Q9Z0Y9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nr1h3Q9Z0Y9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Gm10231-201ENSMUST00000181584 441 ntBASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Gm10175-202ENSMUST00000208752 441 ntBASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nr1h3Q9Z0Y9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nr1h3Q9Z0Y9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nr1h3Q9Z0Y9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nr1h3Q9Z0Y9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms